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    ycjO putative ABC transporter membrane subunit YcjO [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945888, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ycjO
    Official Full Name
    putative ABC transporter membrane subunit YcjO
    Primary source
    ECOCYC:G6649
    Locus tag
    b1311
    See related
    ASAP:ABE-0004405
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1306
    Summary
    Part of the putative ycjM-V operon, which encodes a putative transport and catabolism system for an unknown sugar. [More information is available at EcoGene: EG13912]. YcjO is a membrane component of a predicted ATP-dependent sugar transporter. [More information is available at EcoCyc: G6649].
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    Genomic context

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    Sequence:
    NC_000913.3 (1373222..1374103)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene glucosylglycerate phosphorylase Neighboring gene putative ABC transporter periplasmic binding protein YcjN Neighboring gene putative ABC transporter membrane subunit YcjP Neighboring gene D-guloside 3-dehydrogenase Neighboring gene 3-dehydro-D-guloside 4-epimerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ATP-binding cassette transporters in Escherichia coli. Moussatova A, et al. Biochim Biophys Acta, 2008 Sep. PMID 18634750
    2. Getting in or out: early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters. Saurin W, et al. J Mol Evol, 1999 Jan. PMID 9873074
    3. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative ABC transporter membrane subunit YcjO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1373222..1374103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415827.1 putative ABC transporter membrane subunit YcjO [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377BGQ3, A0A830V2X9
      Conserved Domains (1) summary
      COG1175
      Location:29 → 293
      UgpA; ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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