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    yqiH putative fimbrial chaperone YqiH [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947531, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yqiH
    Official Full Name
    putative fimbrial chaperone YqiH
    Primary source
    ECOCYC:G7586
    Locus tag
    b3047
    See related
    ASAP:ABE-0010003
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3036
    Summary
    Probable false positive lipoprotein prediction, Cys not conserved. [More information is available at EcoGene: EG14229]. YqiH is a hypothetical protein. [More information is available at EcoCyc: G7586].
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    Genomic context

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    Sequence:
    NC_000913.3 (3189881..3190630)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial protein YgiL Neighboring gene pseudo Neighboring gene IS2 insertion element repressor InsA Neighboring gene IS2 insertion element protein InsB Neighboring gene putative fimbrial protein YqiI Neighboring gene surface composition regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conserved immunoglobulin-like features in a family of periplasmic pilus chaperones in bacteria. Holmgren A, et al. EMBO J, 1992 Apr. PMID 1348692, Free PMC Article
    2. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    3. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
    4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein folding chaperone IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in chaperone-mediated protein folding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in chaperone-mediated protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in outer membrane-bounded periplasmic space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in outer membrane-bounded periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative fimbrial chaperone YqiH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3189881..3190630
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417519.4 putative fimbrial chaperone YqiH [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417519.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3JBX6
      Conserved Domains (1) summary
      COG3121
      Location:1 → 233
      FimC; P pilus assembly protein, chaperone PapD [Extracellular structures]
    Nucleotide Protein
    Heading Accession and Version

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