U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    slyX protein SlyX [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947849, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    slyX
    Official Full Name
    protein SlyX
    Primary source
    ECOCYC:EG11664
    Locus tag
    b3348
    See related
    ASAP:ABE-0010944
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3335
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (3477640..3477858)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene sulfurtransferase complex subunit TusD Neighboring gene DNA-binding transcriptional regulator YheO Neighboring gene peptidyl-prolyl cis-trans isomerase FkpA Neighboring gene FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Neighboring gene DUF2387 domain-containing protein YheV

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. slyD, a host gene required for phi X174 lysis, is related to the FK506-binding protein family of peptidyl-prolyl cis-trans-isomerases. Roof WD, et al. J Biol Chem, 1994 Jan 28. PMID 8300625
    2. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites. Qin ZS, et al. Nat Biotechnol, 2003 Apr. PMID 12627170
    3. Factors influencing the identification of transcription factor binding sites by cross-species comparison. McCue LA, et al. Genome Res, 2002 Oct. PMID 12368244, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein SlyX

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3477640..3477858
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417807.1 protein SlyX [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417807.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7D7P6K4, A0A9P2ICS7
      Conserved Domains (1) summary
      PRK02793
      Location:1 → 72
      PRK02793; phi X174 lysis protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.