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    ybbA putative ABC transporter ATP-binding protein YbbA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945122, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybbA
    Official Full Name
    putative ABC transporter ATP-binding protein YbbA
    Primary source
    ECOCYC:EG11657
    Locus tag
    b0495
    See related
    ASAP:ABE-0001717
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0489
    Summary
    YbbA is an ATP-binding component of a predicted ABC superfamily metabolite uptake transporter. [More information is available at EcoCyc: EG11657].
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    Genomic context

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    Sequence:
    NC_000913.3 (519733..520419)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene chaperedoxin Neighboring gene NADP(+)-dependent aldehyde reductase YbbO Neighboring gene multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 Neighboring gene putative ABC transporter membrane subunit YbbP Neighboring gene protein RhsD Neighboring gene PF15631 family protein YbbC Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Escherichia coli thioesterase I, molecular cloning and sequencing of the structural gene and identification as a periplasmic enzyme. Cho H, et al. J Biol Chem, 1993 May 5. PMID 8098033
    2. From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Maillet I, et al. Proteomics, 2007 Apr. PMID 17366475
    3. The Escherichia coli ATP-binding cassette (ABC) proteins. Linton KJ, et al. Mol Microbiol, 1998 Apr. PMID 9593292
    4. Getting in or out: early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters. Saurin W, et al. J Mol Evol, 1999 Jan. PMID 9873074
    5. Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification. Liu F, et al. Nat Commun, 2017 May 19. PMID 28524877, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative ABC transporter ATP-binding protein YbbA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      519733..520419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415028.1 putative ABC transporter ATP-binding protein YbbA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415028.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376X572, A0A8S7T0G4, A0A8T3USL8
      Conserved Domains (1) summary
      PRK10584
      Location:1 → 228
      PRK10584; putative ABC transporter ATP-binding protein YbbA; Provisional
    Nucleotide Protein
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