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    narY nitrate reductase Z subunit beta [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946034, updated on 3-Dec-2024

    Summary

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    Official Symbol
    narY
    Official Full Name
    nitrate reductase Z subunit beta
    Primary source
    ECOCYC:EG10647
    Locus tag
    b1467
    See related
    ASAP:ABE-0004896
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    chlZ; ECK1461
    Summary
    Stationary phase induced, RpoS-dependent. [More information is available at EcoGene: EG10647]. The subunit is the electron transfer subunit containing the iron-sulfur clusters . [More information is available at EcoCyc: EG10647].
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    Genomic context

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    Sequence:
    NC_000913.3 (1537309..1538853, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene PF02567 family protein YddE Neighboring gene nitrate reductase Z subunit gamma Neighboring gene NarW, putative private chaperone for NarZ nitrate reductase subunit Neighboring gene nitrate reductase Z subunit alpha Neighboring gene nitrate/nitrite transporter NarU Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPR and redox characterization of iron-sulfur centers in nitrate reductases A and Z from Escherichia coli. Evidence for a high-potential and a low-potential class and their relevance in the electron-transfer mechanism. Guigliarelli B, et al. Eur J Biochem, 1992 Jul 1. PMID 1321049
    2. Purification and further characterization of the second nitrate reductase of Escherichia coli K12. Iobbi-Nivol C, et al. Eur J Biochem, 1990 Mar 30. PMID 2139607
    3. Biochemical and immunological evidence for a second nitrate reductase in Escherichia coli K12. Iobbi C, et al. Eur J Biochem, 1987 Oct 15. PMID 3311749
    4. Localization and regulation of synthesis of nitrate reductase in Escherichia coli. Showe MK, et al. J Bacteriol, 1968 Apr. PMID 4869216, Free PMC Article
    5. Expression of the Escherichia coli NRZ nitrate reductase is highly growth phase dependent and is controlled by RpoS, the alternative vegetative sigma factor. Chang L, et al. Mol Microbiol, 1999 Nov. PMID 10564515

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: Nitrate reductases of Escherichia coli: sequence of the second nitrate reductase and comparison with that encoded by the narGHJI operon.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 3 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables electron transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables electron transfer activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables iron-sulfur cluster binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nitrate reductase (quinone) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nitrate reductase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables nitrate reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within anaerobic electron transport chain IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in anaerobic electron transport chain NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in anaerobic respiration IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within anaerobic respiration IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in nitrate assimilation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in nitrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in nitrate metabolic process NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of nitrate reductase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of nitrate reductase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of nitrate reductase complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    nitrate reductase Z subunit beta
    NP_415984.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1537309..1538853 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415984.1 nitrate reductase Z subunit beta [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415984.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7B6L2
      Conserved Domains (1) summary
      COG1140
      Location:1 → 512
      NarY; Nitrate reductase beta subunit [Energy production and conversion, Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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