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    ynfG putative oxidoreductase YnfG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945638, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ynfG
    Official Full Name
    putative oxidoreductase YnfG
    Primary source
    ECOCYC:G6847
    Locus tag
    b1589
    See related
    ASAP:ABE-0005309
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1584
    Summary
    The physiological substrate and relevance of the YnfFGH S- and N-oxide reductase is unknown. [More information is available at EcoGene: EG13845]. YnfG is highly similar to DmsB, the iron-sulfur cluster-containing subunit of the dimethyl sulfoxide reductase heterotrimer, and cross-reacts with an anti-DmsB antibody. [More information is available at EcoCyc: G6847].
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    Genomic context

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    Sequence:
    NC_000913.3 (1662990..1663607)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative selenate reductase YnfE Neighboring gene putative selenate reductase YnfF Neighboring gene putative menaquinol dehydrogenase Neighboring gene redox enzyme maturation protein DmsD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Activation and repression at the Escherichia coli ynfEFGHI operon promoter. Xu M, et al. J Bacteriol, 2009 May. PMID 19251855, Free PMC Article
    2. A genetic analysis of in vivo selenate reduction by Salmonella enterica serovar Typhimurium LT2 and Escherichia coli K12. Guymer D, et al. Arch Microbiol, 2009 Jun. PMID 19415239
    3. Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. Inoue T, et al. J Bacteriol, 2007 Feb. PMID 17122336, Free PMC Article
    4. The Escherichia coli ynfEFGHI operon encodes polypeptides which are paralogues of dimethyl sulfoxide reductase (DmsABC). Lubitz SP, et al. Arch Biochem Biophys, 2003 Oct 15. PMID 14522592
    5. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in anaerobic respiration NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of oxidoreductase complex NAS
    Non-traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative oxidoreductase YnfG
    NP_416106.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1662990..1663607
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416106.1 putative oxidoreductase YnfG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416106.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376M7F4
      Conserved Domains (1) summary
      TIGR02951
      Location:4 → 163
      DMSO_dmsB; DMSO reductase, iron-sulfur subunit
    Nucleotide Protein
    Heading Accession and Version

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