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    rsxB SoxR [2Fe-2S] reducing system protein RsxB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946146, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rsxB
    Official Full Name
    SoxR [2Fe-2S] reducing system protein RsxB
    Primary source
    ECOCYC:G6872
    Locus tag
    b1628
    See related
    ASAP:ABE-0005452
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1624; ydgM
    Summary
    RsxB has an N-terminal hydrophobic region and two ferredoxin-like motifs . [More information is available at EcoCyc: G6872].
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    Genomic context

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    Sequence:
    NC_000913.3 (1706348..1706926)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene H-NS- and StpA-binding protein Neighboring gene DUF2569 domain-containing inner membrane protein YdgK Neighboring gene SoxR [2Fe-2S] reducing system protein RsxA Neighboring gene SoxR [2Fe-2S] reducing system protein RsxC Neighboring gene SoxR [2Fe-2S] reducing system protein RsxD Neighboring gene SoxR [2Fe-2S] reducing system protein RsxG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of components of a reducing system for SoxR in the cytoplasmic membrane of Escherichia coli. Lee KL, et al. J Microbiol, 2022 Apr. PMID 35344189
    2. The genes encoding endonuclease VIII and endonuclease III in Escherichia coli are transcribed as the terminal genes in operons. Gifford CM, et al. Nucleic Acids Res, 2000 Feb 1. PMID 10637328, Free PMC Article
    3. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    4. Overexpression in Escherichia coli of the rnf genes from Rhodobacter capsulatus--characterization of two membrane-bound iron-sulfur proteins. Jouanneau Y, et al. Eur J Biochem, 1998 Jan 15. PMID 9492268
    5. Membrane localization, topology, and mutual stabilization of the rnfABC gene products in Rhodobacter capsulatus and implications for a new family of energy-coupling NADH oxidoreductases. Kumagai H, et al. Biochemistry, 1997 May 6. PMID 9154934

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    contributes_to oxidoreductase activity, acting on NAD(P)H IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in electron transport chain IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of oxidoreductase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    part_of plasma membrane protein complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SoxR [2Fe-2S] reducing system protein RsxB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1706348..1706926
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416145.1 SoxR [2Fe-2S] reducing system protein RsxB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416145.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A444R220
      Conserved Domains (1) summary
      PRK05113
      Location:1 → 192
      PRK05113; electron transport complex protein RnfB; Provisional
    Nucleotide Protein
    Heading Accession and Version

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