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    torY cytochrome c quinol dehydrogenase TorY [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946490, updated on 3-Dec-2024

    Summary

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    Official Symbol
    torY
    Official Full Name
    cytochrome c quinol dehydrogenase TorY
    Primary source
    ECOCYC:G7023
    Locus tag
    b1873
    See related
    ASAP:ABE-0006246
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1874; yecK
    Summary
    TorY is a c-type cytochrome that is anchored to the inner membrane. [More information is available at EcoCyc: G7023].
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    Genomic context

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    Sequence:
    NC_000913.3 (1957032..1958132, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene carboxy-S-adenosyl-L-methionine synthase Neighboring gene tRNA U34 carboxymethyltransferase Neighboring gene trimethylamine N-oxide reductase 2 Neighboring gene ncRNA Neighboring gene PF03932 family protein CutC Neighboring gene putative metal-binding enzyme YecM

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Alternative gene for biotin sulfoxide reduction in Escherichia coli K-12. del Campillo Campbell A, et al. J Mol Evol, 1996 Feb. PMID 8919859
    2. The torYZ (yecK bisZ) operon encodes a third respiratory trimethylamine N-oxide reductase in Escherichia coli. Gon S, et al. J Bacteriol, 2000 Oct. PMID 11004177, Free PMC Article
    3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
    4. Interaction network containing conserved and essential protein complexes in Escherichia coli. Butland G, et al. Nature, 2005 Feb 3. PMID 15690043
    5. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables electron transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables electron transfer activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables heme binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within anaerobic electron transport chain IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in anaerobic respiration IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in anaerobic respiration IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Gram-negative-bacterium-type cell wall IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome c quinol dehydrogenase TorY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1957032..1958132 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416387.1 cytochrome c quinol dehydrogenase TorY [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416387.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N8R610
      Conserved Domains (2) summary
      TIGR02162
      Location:29 → 365
      torC; trimethylamine-N-oxide reductase c-type cytochrome TorC
      pfam03264
      Location:27 → 174
      Cytochrom_NNT; NapC/NirT cytochrome c family, N-terminal region
    Nucleotide Protein
    Heading Accession and Version

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