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    gatB galactitol-specific PTS enzyme IIB component [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946610, updated on 3-Dec-2024

    Summary

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    Official Symbol
    gatB
    Official Full Name
    galactitol-specific PTS enzyme IIB component
    Primary source
    ECOCYC:EG12415
    Locus tag
    b2093
    See related
    ASAP:ABE-0006930
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2086
    Summary
    [More information is available at EcoCyc: EG12415].
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    Genomic context

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    Sequence:
    NC_000913.3 (2174282..2174566, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene galactitol-1-phosphate 5-dehydrogenase Neighboring gene pseudo Neighboring gene galactitol-specific PTS enzyme IIA component Neighboring gene putative tagatose-1,6-bisphosphate aldolase 2 chaperone

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NMR structure of the enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system and its interaction with GatA. Volpon L, et al. Protein Sci, 2006 Oct. PMID 16963640, Free PMC Article
    2. Effectiveness of intramuscularly administered cyanide antidotes on methemoglobin formation and survival. Vick JA, et al. J Appl Toxicol, 1996 Nov-Dec. PMID 8956097
    3. Minimally invasive iliac cancellous bone graft harvesting. Boustred AM, et al. Plast Reconstr Surg, 1997 May. PMID 9145154
    4. Sequence of the gat operon for galactitol utilization from a wild-type strain EC3132 of Escherichia coli. Nobelmann B, et al. Biochim Biophys Acta, 1995 May 17. PMID 7772602
    5. Effects of a static magnetic field on cell growth and gene expression in Escherichia coli. Potenza L, et al. Mutat Res, 2004 Jul 11. PMID 15238230

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: Small genes/gene-products in Escherichia coli K-12.
    2. NMR spectroscopy solution of the three-dimensional structure of the IIB subunit (GatB). An NMR titration was performed to identify the GatA-interacting residues.
      Title: NMR structure of the enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system and its interaction with GatA.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein-phosphocysteine-galactitol-phosphotransferase system transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein-phosphocysteine-sugar phosphotransferase activity RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in galactitol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within galactitol transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in galactitol transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within phosphoenolpyruvate-dependent sugar phosphotransferase system IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in phosphoenolpyruvate-dependent sugar phosphotransferase system IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in phosphoenolpyruvate-dependent sugar phosphotransferase system NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within phosphoenolpyruvate-dependent sugar phosphotransferase system RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    part_of transmembrane transporter complex NAS
    Non-traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galactitol-specific PTS enzyme IIB component
    NP_416596.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2174282..2174566 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416596.1 galactitol-specific PTS enzyme IIB component [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416596.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A485JEM3, A0A7D7PE19
      Conserved Domains (1) summary
      PRK10310
      Location:1 → 94
      PRK10310; PTS galactitol transporter subunit IIB
    Nucleotide Protein
    Heading Accession and Version

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