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    tapT tRNA 3-amino-3-carboxypropyltransferase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947057, updated on 17-Dec-2024

    Summary

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    Official Symbol
    tapT
    Official Full Name
    tRNA 3-amino-3-carboxypropyltransferase
    Primary source
    ECOCYC:G7349
    Locus tag
    b2583
    See related
    ASAP:ABE-0008503
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2581; tuaA; yfiP
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    Genomic context

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    Sequence:
    NC_000913.3 (2719223..2719921)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative methyltransferase YfiF Neighboring gene reduced thioredoxin 2 Neighboring gene peptidyl-lysine N-acetyltransferase Neighboring gene protein PssL Neighboring gene phosphatidylserine synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of the 3-amino-3-carboxypropyl (acp) transferase enzyme responsible for acp3U formation at position 47 in Escherichia coli tRNAs. Meyer B, et al. Nucleic Acids Res, 2020 Feb 20. PMID 31863583, Free PMC Article
    2. Biogenesis and functions of aminocarboxypropyluridine in tRNA. Takakura M, et al. Nat Commun, 2019 Dec 5. PMID 31804502, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables tRNA-uridine aminocarboxypropyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables tRNA-uridine aminocarboxypropyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA modification IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within tRNA modification IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in tRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    tRNA 3-amino-3-carboxypropyltransferase
    NP_417078.4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2719223..2719921
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417078.4 tRNA 3-amino-3-carboxypropyltransferase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417078.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T6PP22
      Conserved Domains (1) summary
      COG3148
      Location:2 → 232
      YfiP; Uncharacterized conserved protein YfiP, DTW domain [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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