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    glaR DNA-binding transcriptional repressor GlaR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948055, updated on 3-Dec-2024

    Summary

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    Official Symbol
    glaR
    Official Full Name
    DNA-binding transcriptional repressor GlaR
    Primary source
    ECOCYC:EG12386
    Locus tag
    b2664
    See related
    ASAP:ABE-0008765
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    csiR; ECK2658; gabC; ygaE
    Summary
    [More information is available at EcoGene: EG12386]. GabC is a regulator of gab gene expression . [More information is available at EcoCyc: EG12386].
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    Genomic context

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    Sequence:
    NC_000913.3 (2795674..2796336)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 4-aminobutyrate aminotransferase GabT Neighboring gene 4-aminobutanoate:H(+) symporter Neighboring gene K(+) binding protein Neighboring gene Pmp3 family protein YqaE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic analysis of the gamma-aminobutyrate utilization pathway in Escherichia coli K-12. Dover S, et al. J Bacteriol, 1974 Feb. PMID 4590473, Free PMC Article
    2. Control of the pathway of -aminobutyrate breakdown in Escherichia coli K-12. Dover S, et al. J Bacteriol, 1972 Apr. PMID 4552985, Free PMC Article
    3. Utilization of -aminobutyric acid as the sole carbon and nitrogen source by Escherichia coli K-12 mutants. Dover S, et al. J Bacteriol, 1972 Feb. PMID 4550821, Free PMC Article
    4. Novel type of catabolite repression in the pathway of gamma-aminobutyrate breakdown in Escherichia coli K-12. Dover S, et al. FEBS Lett, 1973 Dec 1. PMID 4357819
    5. In vivo cloning and characterization of the gabCTDP gene cluster of Escherichia coli K-12. Metzer E, et al. J Bacteriol, 1990 Jun. PMID 2188954, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of DNA-templated transcription initiation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of DNA-templated transcription initiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DNA-binding transcriptional repressor GlaR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2795674..2796336
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417150.4 DNA-binding transcriptional repressor GlaR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417150.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A828NHB7
      Conserved Domains (1) summary
      PRK11534
      Location:1 → 220
      PRK11534; DNA-binding transcriptional regulator CsiR; Provisional
    Nucleotide Protein
    Heading Accession and Version

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