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    yqiJ DUF1449 domain-containing inner membrane protein YqiJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947530, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yqiJ
    Official Full Name
    DUF1449 domain-containing inner membrane protein YqiJ
    Primary source
    ECOCYC:G7588
    Locus tag
    b3050
    See related
    ASAP:ABE-0010011
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3039
    Summary
    yqiK and yqiJ probably form an operon; PHB and NfeD/STOPP family proteins are often operonic. [More information is available at EcoGene: EG14231].
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    Genomic context

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    Sequence:
    NC_000913.3 (3192208..3192837)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial protein YqiI Neighboring gene surface composition regulator Neighboring gene flotillin family inner membrane protein YqiK Neighboring gene ncRNA Neighboring gene putative toxic peptide IbsD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of prokaryotic SPFH proteins. Hinderhofer M, et al. BMC Evol Biol, 2009 Jan 12. PMID 19138386, Free PMC Article
    2. Eukaryotic and prokaryotic stomatins: the proteolytic link. Green JB, et al. Blood Cells Mol Dis, 2004 May-Jun. PMID 15121101
    3. The Escherichia coli plasma membrane contains two PHB (prohibitin homology) domain protein complexes of opposite orientations. Chiba S, et al. Mol Microbiol, 2006 Apr. PMID 16573693
    4. Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. Winterberg KM, et al. Appl Environ Microbiol, 2005 Jan. PMID 15640221, Free PMC Article
    5. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF1449 domain-containing inner membrane protein YqiJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3192208..3192837
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417522.1 DUF1449 domain-containing inner membrane protein YqiJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417522.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAN3IKR9
      Conserved Domains (1) summary
      pfam07290
      Location:8 → 200
      DUF1449; Protein of unknown function (DUF1449)
    Nucleotide Protein
    Heading Accession and Version

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