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    ygjJ protein YgjJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947597, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ygjJ
    Official Full Name
    protein YgjJ
    Primary source
    ECOCYC:G7598
    Locus tag
    b3079
    See related
    ASAP:ABE-0010115
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3069
    Summary
    The first 24 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG12721].
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    Genomic context

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    Sequence:
    NC_000913.3 (3227801..3228871)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene evolved beta-D-galactosidase subunit alpha Neighboring gene DUF386 domain-containing evolved beta-D-galactosidase subunit beta Neighboring gene putative transporter YgjI Neighboring gene glycoside hydrolase Neighboring gene 2,4-dienoyl-CoA reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria. Berven FS, et al. Nucleic Acids Res, 2004 Jul 1. PMID 15215418, Free PMC Article
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein YgjJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3227801..3228871
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417550.1 protein YgjJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417550.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1MND9
    Nucleotide Protein
    Heading Accession and Version

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