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    gltD glutamate synthase subunit GltD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947723, updated on 17-Dec-2024

    Summary

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    Official Symbol
    gltD
    Official Full Name
    glutamate synthase subunit GltD
    Primary source
    ECOCYC:EG10404
    Locus tag
    b3213
    See related
    ASAP:ABE-0010547
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    aspB; ECK3203; ossB; psiQ
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    Genomic context

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    Sequence:
    NC_000913.3 (3359198..3360616)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene radical SAM family oxidoreductase YhcC Neighboring gene glutamate synthase subunit GltB Neighboring gene periplasmic protein GltF Neighboring gene putative fimbrial chaperone YhcA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and sequencing of the gene for the Thiobacillus ferrooxidans ATCC33020 glutamate synthase (GOGAT) small subunit and complementation of an Escherichia coli gltD mutant. Deane SM, et al. Gene, 1996 Oct 24. PMID 8921877
    2. Amino acid sequence analysis of the glutamate synthase enzyme from Escherichia coli K-12. Gosset G, et al. Protein Seq Data Anal, 1989. PMID 2643092
    3. Determination of the nucleotide sequence for the glutamate synthase structural genes of Escherichia coli K-12. Oliver G, et al. Gene, 1987. PMID 3326786
    4. Structural organization of the genes that encode two glutamate synthase subunits of Escherichia coli. Garciarrubio A, et al. Gene, 1983 Dec. PMID 6368318
    5. Roles of SpoT and FNR in NH4+ assimilation and osmoregulation in GOGAT (glutamate synthase)-deficient mutants of Escherichia coli. Saroja GN, et al. J Bacteriol, 1996 Jul. PMID 8763938, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on mature peptide
      Title: '98 Escherichia coli SWISS-2DPAGE database update.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glutamate synthase (NADPH) activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glutamate synthase (NADPH) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-glutamate biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in L-glutamate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in ammonia assimilation cycle IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within glutamate biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in glutamate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of glutamate synthase complex (NADPH) IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutamate synthase subunit GltD
    NP_417680.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3359198..3360616
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417680.1 glutamate synthase subunit GltD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417680.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AS56, A0A6C9QI75
      Conserved Domains (1) summary
      TIGR01318
      Location:6 → 472
      gltD_gamma_fam; glutamate synthase small subunit family protein, proteobacterial
    Nucleotide Protein
    Heading Accession and Version

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