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    tusD sulfurtransferase complex subunit TusD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947852, updated on 17-Dec-2024

    Summary

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    Official Symbol
    tusD
    Official Full Name
    sulfurtransferase complex subunit TusD
    Primary source
    ECOCYC:G7714
    Locus tag
    b3345
    See related
    ASAP:ABE-0010933
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3332; yheN
    Summary
    In YheLMN(TusBCD) complex, which mediates sulfur transfer from SirA(TusA) to YheLMN(TusBCD) binding partner YccK(TusE). [More information is available at EcoGene: EG12898]. TusD is labeled by 35S sulfur during 2-thiouridine formation in vitro. [More information is available at EcoCyc: G7714].
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    Genomic context

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    Sequence:
    NC_000913.3 (3475332..3475718, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 30S ribosomal subunit protein S12 Neighboring gene sulfurtransferase complex subunit TusB Neighboring gene sulfurtransferase complex subunit TusC Neighboring gene DNA-binding transcriptional regulator YheO Neighboring gene peptidyl-prolyl cis-trans isomerase FkpA Neighboring gene protein SlyX

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex. Numata T, et al. Structure, 2006 Feb. PMID 16472754
    2. Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. Inoue T, et al. J Bacteriol, 2007 Feb. PMID 17122336, Free PMC Article
    3. A novel family of Escherichia coli toxin-antitoxin gene pairs. Brown JM, et al. J Bacteriol, 2003 Nov. PMID 14594833, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positions. Ikeuchi Y, et al. Mol Cell, 2006 Jan 6. PMID 16387657

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables sulfur carrier activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables sulfur carrier activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables sulfurtransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in tRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in tRNA wobble position uridine thiolation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in tRNA wobble position uridine thiolation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within tRNA wobble position uridine thiolation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of sulfurtransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of sulfurtransferase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of sulfurtransferase complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sulfurtransferase complex subunit TusD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3475332..3475718 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417804.1 sulfurtransferase complex subunit TusD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417804.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S0FJF1
      Conserved Domains (1) summary
      PRK00207
      Location:1 → 128
      PRK00207; sulfurtransferase complex subunit TusD
    Nucleotide Protein
    Heading Accession and Version

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