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    rhaM L-rhamnose mutarotase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948402, updated on 17-Dec-2024

    Summary

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    Official Symbol
    rhaM
    Official Full Name
    L-rhamnose mutarotase
    Primary source
    ECOCYC:EG11865
    Locus tag
    b3901
    See related
    ASAP:ABE-0012729
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3894; yiiL
    Summary
    Utilizing NMR techniques, RhaM was shown to catalyze the anomeric conversion of rhamnose . [More information is available at EcoCyc: EG11865].
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    Genomic context

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    Sequence:
    NC_000913.3 (4093124..4093438, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene peptidase M42 family protein FrvX Neighboring gene putative PTS enzyme IIBC component FrvB Neighboring gene putative PTS enzyme IIA component FrvA Neighboring gene rhamnulose-1-phosphate aldolase Neighboring gene L-rhamnose isomerase Neighboring gene rhamnulokinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    2. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. NMR application probes a novel and ubiquitous family of enzymes that alter monosaccharide configuration. Ryu KS, et al. J Biol Chem, 2004 Jun 11. PMID 15060078
    5. Structural insights into the monosaccharide specificity of Escherichia coli rhamnose mutarotase. Ryu KS, et al. J Mol Biol, 2005 May 27. PMID 15876375

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables L-rhamnose mutarotase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables L-rhamnose mutarotase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables racemase and epimerase activity, acting on carbohydrates and derivatives IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables racemase and epimerase activity, acting on carbohydrates and derivatives IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in rhamnose catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within rhamnose catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in rhamnose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    L-rhamnose mutarotase
    NP_418337.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4093124..4093438 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418337.1 L-rhamnose mutarotase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418337.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376X5Y0
      Conserved Domains (1) summary
      TIGR02625
      Location:3 → 104
      YiiL_rotase; L-rhamnose mutarotase
    Nucleotide Protein
    Heading Accession and Version

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