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    intB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948782, updated on 3-Dec-2024

    Summary

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    Official Symbol
    intB
    Primary source
    ECOCYC:EG12364
    Locus tag
    b4271
    See related
    ASAP:ABE-0013992
    Gene type
    pseudo
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4264; int(P4); yjgC
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    Genomic context

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    Sequence:
    NC_000913.3 (4496750..4497940)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene NADPH-dependent aldehyde reductase Ahr Neighboring gene tRNA-Leu Neighboring gene IS2 insertion element repressor InsA Neighboring gene IS2 insertion element protein InsB Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Role of pathogenicity island-associated integrases in the genome plasticity of uropathogenic Escherichia coli strain 536. Hochhut B, et al. Mol Microbiol, 2006 Aug. PMID 16879640
    2. Multiple group II self-splicing introns in mobile DNA from Escherichia coli. Ferat JL, et al. C R Acad Sci III, 1994 Feb. PMID 7994604
    3. Unique stress response to the lactoperoxidase-thiocyanate enzyme system in Escherichia coli. Sermon J, et al. Res Microbiol, 2005 Mar. PMID 15748988
    4. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    5. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Only intB was required for site-specific excision of the new pathogenicity island.
      Title: Role of pathogenicity island-associated integrases in the genome plasticity of uropathogenic Escherichia coli strain 536.
    Submit: New GeneRIF Correction

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables prophage integrase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in provirus excision IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

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