U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yjjV putative metal-dependent hydrolase YjjV [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 2847741, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yjjV
    Official Full Name
    putative metal-dependent hydrolase YjjV
    Primary source
    ECOCYC:G7952
    Locus tag
    b4378
    See related
    ASAP:ABE-0014356
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4370
    Summary
    AFMB Structural Genomics target Number 11 (http://afmb.cnrs-mrs.fr/article171.html). [More information is available at EcoGene: EG12598]. A tatD ycfH yjjV triple mutant does not exhibit phenotypes suggesting involvement of these proteins in the Sec-independent protein export system in which TatA, TatB, and TatC participate . [More information is available at EcoCyc: G7952].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (4613481..4614260)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene periplasmic chaperone OsmY Neighboring gene DUF1328 domain-containing protein YtjA Neighboring gene putative patatin-like phospholipase YjjU Neighboring gene putative glycyl-radical enzyme activating enzyme YjjW Neighboring gene DUF3029 domain-containing protein YjjI Neighboring gene deoxyribose-phosphate aldolase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Maillet I, et al. Proteomics, 2007 Apr. PMID 17366475
    2. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites. Qin ZS, et al. Nat Biotechnol, 2003 Apr. PMID 12627170
    3. Factors influencing the identification of transcription factor binding sites by cross-species comparison. McCue LA, et al. Genome Res, 2002 Oct. PMID 12368244, Free PMC Article
    4. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    5. Interaction network containing conserved and essential protein complexes in Escherichia coli. Butland G, et al. Nature, 2005 Feb 3. PMID 15690043

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative metal-dependent hydrolase YjjV

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4613481..4614260
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_026291.2 putative metal-dependent hydrolase YjjV [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for YP_026291.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1MME9
      Conserved Domains (1) summary
      PRK11449
      Location:1 → 258
      PRK11449; metal-dependent hydrolase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.