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    ybgO putative fimbrial protein YbgO [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947550, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ybgO
    Official Full Name
    putative fimbrial protein YbgO
    Primary source
    ECOCYC:G6385
    Locus tag
    b0716
    See related
    ASAP:ABE-0002441
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0705
    Summary
    YbgO is a hypothetical protein. [More information is available at EcoCyc: G6385].
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    Genomic context

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    Sequence:
    NC_000913.3 (747921..748982, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 5-oxoprolinase component C Neighboring gene 5-oxoprolinase component A Neighboring gene endonuclease VIII Neighboring gene putative regulator Neighboring gene putative fimbrial chaperone YbgP Neighboring gene putative fimbrial usher protein YbgQ Neighboring gene putative fimbrial protein YbgD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    2. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in pilus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative fimbrial protein YbgO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      747921..748982 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415244.4 putative fimbrial protein YbgO [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415244.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3JK50
      Conserved Domains (1) summary
      cl01416
      Location:218 → 353
      Fimbrial; Fimbrial protein
    Nucleotide Protein
    Heading Accession and Version

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