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    ycaM putative transporter YcaM [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945518, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ycaM
    Official Full Name
    putative transporter YcaM
    Primary source
    ECOCYC:G6466
    Locus tag
    b0899
    See related
    ASAP:ABE-0003058
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0890
    Summary
    YcaM was found, in random transposon mutagenesis studies, to be required for growth in optimum (rich medium at 37 degrees C) growth conditions but not under cold conditions (15 degrees C) or in minimal medium . [More information is available at EcoCyc: G6466].
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    Genomic context

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    Sequence:
    NC_000913.3 (947229..948659)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative hydrolase YcaC Neighboring gene putative transporter YcaD Neighboring gene putative DNA-binding transcriptional regulator YcaN Neighboring gene putative oxidoreductase YcaK

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Scanning the Escherichia coli chromosome by random transposon mutagenesis and multiple phenotypic screening. Serina S, et al. Res Microbiol, 2004 Oct. PMID 15380559
    2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative transporter YcaM

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      947229..948659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415419.2 putative transporter YcaM [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415419.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7ECC8
      Conserved Domains (1) summary
      cl40732
      Location:17 → 429
      AA_permease_2; Amino acid permease
    Nucleotide Protein
    Heading Accession and Version

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