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    ycgX DUF1398 domain-containing protein YcgX [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945733, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ycgX
    Official Full Name
    DUF1398 domain-containing protein YcgX
    Primary source
    ECOCYC:G6601
    Locus tag
    b1161
    See related
    ASAP:ABE-0003897
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1148
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    Genomic context

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    Sequence:
    NC_000913.3 (1212703..1213107, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YmgK Neighboring gene protein YmgL Neighboring gene DNA-binding transcriptional repressor BluR Neighboring gene blue light- and temperature-regulated antirepressor BluF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    2. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    3. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF1398 domain-containing protein YcgX

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1212703..1213107 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415679.1 DUF1398 domain-containing protein YcgX [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415679.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7CVC8
      Conserved Domains (1) summary
      COG5562
      Location:1 → 134
      YbcV; Prophage-encoded protein YbcV, DUF1398 family [Mobilome: prophages, transposons]
    Nucleotide Protein
    Heading Accession and Version

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