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    puuB gamma-glutamylputrescine oxidase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945072, updated on 3-Dec-2024

    Summary

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    Official Symbol
    puuB
    Official Full Name
    gamma-glutamylputrescine oxidase
    Primary source
    ECOCYC:EG11822
    Locus tag
    b1301
    See related
    ASAP:ABE-0004378
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1296; ordL; ycjA
    Summary
    PuuB is probably the -glutamylputrescine oxidase in a putrescine utilization pathway; together with PuuC, -glutamyl--aminobutyrate is produced from -glutamylputrescine . [More information is available at EcoCyc: EG11822].
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    Genomic context

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    Sequence:
    NC_000913.3 (1364232..1365512)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor PuuR Neighboring gene gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase Neighboring gene 4-aminobutyrate aminotransferase PuuE Neighboring gene DNA-binding transcriptional dual regulator PspF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The RIB element in the goaG-pspF intergenic region of Escherichia coli. Jovanovic G, et al. J Bacteriol, 1997 May. PMID 9150200, Free PMC Article
    2. Cloning an Escherichia coli gene encoding a protein remarkably similar to mammalian aldehyde dehydrogenases. Heim R, et al. Gene, 1991 Mar 1. PMID 1840553
    3. A novel putrescine utilization pathway involves gamma-glutamylated intermediates of Escherichia coli K-12. Kurihara S, et al. J Biol Chem, 2005 Feb 11. PMID 15590624
    4. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in putrescine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in putrescine catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    gamma-glutamylputrescine oxidase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1364232..1365512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415817.1 gamma-glutamylputrescine oxidase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415817.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A828P3S9
      Conserved Domains (1) summary
      COG0665
      Location:25 → 406
      DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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