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    pinQ putative recombinase PinQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946088, updated on 3-Dec-2024

    Summary

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    Official Symbol
    pinQ
    Official Full Name
    putative recombinase PinQ
    Primary source
    ECOCYC:G6819
    Locus tag
    b1545
    See related
    ASAP:ABE-0005164
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1538; ydfL
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    Genomic context

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    Sequence:
    NC_000913.3 (1633622..1634212)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YnfT Neighboring gene cold shock protein YdfK Neighboring gene putative tail fiber assembly protein TfaQ Neighboring gene putative prophage side tail fiber protein StfQ Neighboring gene putative prophage DNA-packaging protein NohA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA strand exchange activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA strand exchange activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA integration IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in DNA recombination IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative recombinase PinQ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1633622..1634212
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416063.1 putative recombinase PinQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416063.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8H9XMJ8
      Conserved Domains (1) summary
      COG1961
      Location:3 → 191
      PinE; Site-specific DNA recombinase related to the DNA invertase Pin [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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