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    ydhY putative 4Fe-4S ferredoxin-like protein YdhY [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948749, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydhY
    Official Full Name
    putative 4Fe-4S ferredoxin-like protein YdhY
    Primary source
    ECOCYC:G6902
    Locus tag
    b1674
    See related
    ASAP:ABE-0005589
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1670
    Summary
    YdhY is a predicted ferredoxin-like protein. [More information is available at EcoCyc: G6902].
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    Genomic context

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    Sequence:
    NC_000913.3 (1753851..1754477, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YdhW Neighboring gene putative oxidoreductase YdhV Neighboring gene fumarase D Neighboring gene protein YnhH

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Regulation of the Escherichia coli ydhY-T operon in the presence of alternative electron acceptors. Awad A Al Ibrahim N, et al. Microbiology (Reading), 2017 Apr. PMID 28218056
    2. A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth. Constantinidou C, et al. J Biol Chem, 2006 Feb 24. PMID 16377617
    3. Genome-wide expression analysis indicates that FNR of Escherichia coli K-12 regulates a large number of genes of unknown function. Kang Y, et al. J Bacteriol, 2005 Feb. PMID 15659690, Free PMC Article
    4. Characterization of the Escherichia coli K-12 ydhYVWXUT operon: regulation by FNR, NarL and NarP. Partridge JD, et al. Microbiology (Reading), 2008 Feb. PMID 18227264
    5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative 4Fe-4S ferredoxin-like protein YdhY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1753851..1754477 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416189.1 putative 4Fe-4S ferredoxin-like protein YdhY [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416189.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A828HTF1, A0A830SFJ1
      Conserved Domains (1) summary
      PRK09898
      Location:1 → 208
      PRK09898; ferredoxin-like protein
    Nucleotide Protein
    Heading Accession and Version

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