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    yohJ putative 3-hydroxypropanoate export protein YohJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 949127, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yohJ
    Official Full Name
    putative 3-hydroxypropanoate export protein YohJ
    Primary source
    ECOCYC:EG12023
    Locus tag
    b2141
    See related
    ASAP:ABE-0007078
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2134
    Summary
    YohJ is an inner membrane protein with four predicted transmembrane domains; the C terminus is located in the periplasm . [More information is available at EcoCyc: EG12023].
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    Genomic context

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    Sequence:
    NC_000913.3 (2230624..2231022)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative membrane protein YohP Neighboring gene tRNA-dihydrouridine(16) synthase Neighboring gene putative 3-hydroxypropanoate export protein YohK Neighboring gene cytidine/deoxycytidine deaminase Neighboring gene DUF218 domain-containing protein SanA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of LytSR-regulated genes from Staphylococcus aureus. Brunskill EW, et al. J Bacteriol, 1996 Oct. PMID 8824633, Free PMC Article
    2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative 3-hydroxypropanoate export protein YohJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2230624..2231022
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416646.1 putative 3-hydroxypropanoate export protein YohJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416646.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7HZ82
      Conserved Domains (1) summary
      PRK01821
      Location:1 → 132
      PRK01821; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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