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    yeiL DNA-binding transcriptional activator YeiL [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946670, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yeiL
    Official Full Name
    DNA-binding transcriptional activator YeiL
    Primary source
    ECOCYC:EG12031
    Locus tag
    b2163
    See related
    ASAP:ABE-0007160
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2156
    Summary
    The genes that the YeiL transcriptional activator regulates have not been identified yet, but it has been proposed that this protein might regulate genes involved in post-exponential-phase nitrogen starvation. [More information is available at EcoCyc: EG12031].
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    Genomic context

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    Sequence:
    NC_000913.3 (2255355..2256014)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative nucleoside transporter Neighboring gene pyrimidine-specific ribonucleoside hydrolase RihB Neighboring gene putative pseudouridine transporter Neighboring gene pseudouridine-5'-phosphate glycosidase Neighboring gene putative pseudouridine kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. YeiL, the third member of the CRP-FNR family in Escherichia coli. Anjum MF, et al. Microbiology (Reading), 2000 Dec. PMID 11101674
    2. Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs. Körner H, et al. FEMS Microbiol Rev, 2003 Dec. PMID 14638413
    3. Sequence analysis of TnphoA insertion sites in Vibrio cholerae mutants defective in rugose polysaccharide production. Ali A, et al. Infect Immun, 2000 Dec. PMID 11083805, Free PMC Article
    4. Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. Winterberg KM, et al. Appl Environ Microbiol, 2005 Jan. PMID 15640221, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA-templated transcription IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    DNA-binding transcriptional activator YeiL

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2255355..2256014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416668.3 DNA-binding transcriptional activator YeiL [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416668.3

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B7N5C6, D3H027
      Conserved Domains (1) summary
      PRK10402
      Location:1 → 213
      PRK10402; DNA-binding transcriptional activator YeiL; Provisional
    Nucleotide Protein
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