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    dcrB periplasmic bacteriophage sensitivity protein DcrB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947983, updated on 17-Dec-2024

    Summary

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    Official Symbol
    dcrB
    Official Full Name
    periplasmic bacteriophage sensitivity protein DcrB
    Primary source
    ECOCYC:G7767
    Locus tag
    b3472
    See related
    ASAP:ABE-0011342
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3456; yhhR
    Summary
    DcrB is involved in sensitivity to bacteriophage C6, specifically in the DNA injection upon phage adsorption . [More information is available at EcoCyc: G7767].
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    Genomic context

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    Sequence:
    NC_000913.3 (3609955..3610512)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene sulfur transfer protein TusA Neighboring gene queuosine precursor transporter Neighboring gene putative transporter YhhS Neighboring gene putative transporter YhhT

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli. Pushpker R, et al. Microbiology (Reading), 2022 Dec. PMID 36748554
    2. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    3. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
    4. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
    5. A synergistic role for two predicted inner membrane proteins of Escherichia coli in cell envelope integrity. Mychack A, et al. Mol Microbiol, 2019 Feb. PMID 30368949

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli.
      Title: Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli.
    2. Here, the authors show that YciB and DcrB, two small cytoplasmic membrane proteins of previously unknown functions, play an essential synergistic role in maintaining cell envelope integrity of Escherichia coli.
      Title: A synergistic role for two predicted inner membrane proteins of Escherichia coli in cell envelope integrity.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    periplasmic bacteriophage sensitivity protein DcrB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3609955..3610512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417929.4 periplasmic bacteriophage sensitivity protein DcrB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417929.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A829KWX8, A0AAN1VM95, A0AAN3SFL6
      Conserved Domains (1) summary
      PRK11615
      Location:1 → 185
      PRK11615; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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