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    yiiR DUF805 domain-containing protein YiiR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948417, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yiiR
    Official Full Name
    DUF805 domain-containing protein YiiR
    Primary source
    ECOCYC:EG11875
    Locus tag
    b3921
    See related
    ASAP:ABE-0012809
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3913
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    Genomic context

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    Sequence:
    NC_000913.3 (4112315..4112755)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene triose-phosphate isomerase Neighboring gene DUF1454 domain-containing protein YiiQ Neighboring gene DUF406 domain-containing protein YiiS Neighboring gene universal stress protein D

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    2. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF805 domain-containing protein YiiR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4112315..4112755
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418356.1 DUF805 domain-containing protein YiiR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418356.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D5NSH1
      Conserved Domains (1) summary
      COG3152
      Location:1 → 139
      yhaH; Uncharacterized membrane protein YhaH, DUF805 family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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