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    yjfN protease activator YjfN [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948709, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yjfN
    Official Full Name
    protease activator YjfN
    Primary source
    ECOCYC:G7851
    Locus tag
    b4188
    See related
    ASAP:ABE-0013704
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4184
    Summary
    The first 21 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG12521].
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    Genomic context

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    Sequence:
    NC_000913.3 (4416017..4416292, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative acid--amine ligase YjfC Neighboring gene putative acyl-CoA dehydrogenase AidB Neighboring gene DUF1471 domain-containing putative lipoprotein BsmA Neighboring gene carboxylesterase Neighboring gene DNA-binding transcriptional repressor UlaR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Low molecular weight proteins: a challenge for post-genomic research. Rudd KE, et al. Electrophoresis, 1998 Apr. PMID 9588799
    2. A Small Periplasmic Protein with a Hydrophobic C-Terminal Residue Enhances DegP Proteolysis as a Suicide Activator. Kim S, et al. J Bacteriol, 2018 Feb 1. PMID 28947671, Free PMC Article
    3. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables endopeptidase activator activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables endopeptidase activator activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protease activator YjfN

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4416017..4416292 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418609.4 protease activator YjfN [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418609.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024L6R5, A0A0H3ETG5, A0A0H3PVV4, A0A454AAX3, A0A7I6H1R7, A0A828U0A2, A0A829L5I1, A0A836N709, A0A8E0KSY2, A0AAN3MA86, A0AAN3V1X7, A0AAN4NND3, A0AAV3H0C3, A7ZV59, B1LQK8, D3GVZ2, W1EY96
      Conserved Domains (1) summary
      pfam07338
      Location:35 → 90
      DUF1471; Protein of unknown function (DUF1471)
    Nucleotide Protein
    Heading Accession and Version

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