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    rsmH 16S rRNA m(4)C1402 methyltransferase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944806, updated on 17-Dec-2024

    Summary

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    Official Symbol
    rsmH
    Official Full Name
    16S rRNA m(4)C1402 methyltransferase
    Primary source
    ECOCYC:EG11085
    Locus tag
    b0082
    See related
    ASAP:ABE-0000304
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0083; mraW; yabC
    Summary
    At least four groups have deleted mraW(yabC): [More information is available at EcoGene: EG11085]. MraW is an S-adenosyl-dependent methyltransferase that shows activity toward substrates that are associated with membranes . [More information is available at EcoCyc: EG11085].
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    Genomic context

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    Sequence:
    NC_000913.3 (90094..91035)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator Cra Neighboring gene DNA-binding transcriptional repressor MraZ Neighboring gene cell division protein FtsL Neighboring gene peptidoglycan DD-transpeptidase FtsI Neighboring gene ncRNA Neighboring gene UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Neighboring gene D-alanyl-D-alanine-adding enzyme

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide sequence of the regulatory region of the gene pbpB of Escherichia coli. Gómez MJ, et al. Nucleic Acids Res, 1990 May 11. PMID 2187182, Free PMC Article
    2. On the process of cellular division in Escherichia coli: nucleotide sequence of the gene for penicillin-binding protein 3. Nakamura M, et al. Mol Gen Genet, 1983. PMID 6350821
    3. Tools for characterization of Escherichia coli genes of unknown function. Merlin C, et al. J Bacteriol, 2002 Aug. PMID 12142427, Free PMC Article
    4. A new essential gene of the 'minimal genome' affecting cell division. Dassain M, et al. Biochimie, 1999 Aug-Sep. PMID 10572302
    5. Contribution of the Pmra promoter to expression of genes in the Escherichia coli mra cluster of cell envelope biosynthesis and cell division genes. Mengin-Lecreulx D, et al. J Bacteriol, 1998 Sep. PMID 9721276, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: mraW, an essential gene at the dcw cluster of Escherichia coli codes for a cytoplasmic protein with methyltransferase activity.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables rRNA (cytosine-N4-)-methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables rRNA (cytosine-N4-)-methyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables rRNA (cytosine-N4-)-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in rRNA base methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in rRNA base methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within rRNA base methylation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    16S rRNA m(4)C1402 methyltransferase
    NP_414624.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      90094..91035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414624.1 16S rRNA m(4)C1402 methyltransferase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414624.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FRY8, A0AAP2ZY36, D3H463
      Conserved Domains (1) summary
      PRK00050
      Location:5 → 312
      PRK00050; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
    Nucleotide Protein
    Heading Accession and Version

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