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    sfmF putative fimbrial protein SfmF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944977, updated on 17-Dec-2024

    Summary

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    Official Symbol
    sfmF
    Official Full Name
    putative fimbrial protein SfmF
    Primary source
    ECOCYC:EG12388
    Locus tag
    b0534
    See related
    ASAP:ABE-0001834
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0527; ybcG
    Summary
    Originally identified as a Salmonella fimbriae gene homolog. [More information is available at EcoGene: EG12388].
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    Genomic context

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    Sequence:
    NC_000913.3 (563330..563845)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial usher protein SfmD Neighboring gene putative fimbrial adhesin protein SfmH Neighboring gene putative LuxR family transcriptional regulator FimZ Neighboring gene tRNA-Arg

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide sequence of the region encompassing the int gene of a cryptic prophage and the dna Y gene flanked by a curved DNA sequence of Escherichia coli K12. Muramatsu S, et al. Mol Gen Genet, 1990 Jan. PMID 2183007
    2. Escherichia coli K-12 possesses multiple cryptic but functional chaperone-usher fimbriae with distinct surface specificities. Korea CG, et al. Environ Microbiol, 2010 Jul. PMID 20345943
    3. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cell adhesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in cell adhesion involved in single-species biofilm formation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in pilus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in pilus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative fimbrial protein SfmF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      563330..563845
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415067.1 putative fimbrial protein SfmF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415067.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A641FNI3
      Conserved Domains (1) summary
      PRK09934
      Location:1 → 171
      PRK09934; fimbriae assembly protein
    Nucleotide Protein
    Heading Accession and Version

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