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    ybjN protein YbjN [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945482, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybjN
    Official Full Name
    protein YbjN
    Primary source
    ECOCYC:G6447
    Locus tag
    b0853
    See related
    ASAP:ABE-0002910
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0844
    Summary
    YbjN is a putative sensory transductin regulator that is thought to generally stabilize unstable proteins . [More information is available at EcoCyc: G6447].
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    Genomic context

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    Sequence:
    NC_000913.3 (892957..893433)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1418 domain-containing protein YbjC Neighboring gene NADPH-dependent nitro/quinone reductase NfsA Neighboring gene ribosomal protein S6 modification protein Neighboring gene putrescine ABC transporter periplasmic binding protein Neighboring gene putrescine ABC transporter ATP binding subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The orphan gene ybjN conveys pleiotropic effects on multicellular behavior and survival of Escherichia coli. Wang D, et al. PLoS One, 2011. PMID 21980417, Free PMC Article
    2. Functional analysis of the Escherichia coli genome using the sequence-to-structure-to-function paradigm: identification of proteins exhibiting the glutaredoxin/thioredoxin disulfide oxidoreductase activity. Fetrow JS, et al. J Mol Biol, 1998 Oct 2. PMID 9743619
    3. Escherichia coli genes and pathways involved in surviving extreme exposure to ionizing radiation. Byrne RT, et al. J Bacteriol, 2014 Oct. PMID 25049088, Free PMC Article
    4. Regulation of the nfsA Gene in Escherichia coli by SoxS. Paterson ES, et al. J Bacteriol, 2002 Jan. PMID 11741843, Free PMC Article
    5. Analysis of the temperature-sensitive mutation of Escherichia coli pantothenate kinase reveals YbjN as a possible protein stabilizer. Chen X, et al. Biochem Biophys Res Commun, 2006 Jun 30. PMID 16701556

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of bacterial-type flagellum assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of bacterial-type flagellum-dependent cell motility IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in negative regulation of cell growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in negative regulation of single-species biofilm formation on inanimate substrate IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pilus assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to ionizing radiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein YbjN

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      892957..893433
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415374.1 protein YbjN [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415374.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AJP9
      Conserved Domains (1) summary
      pfam10722
      Location:9 → 131
      YbjN; Putative bacterial sensory transduction regulator
    Nucleotide Protein
    Heading Accession and Version

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