U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yceM putative oxidoreductase YceM [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945204, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yceM
    Official Full Name
    putative oxidoreductase YceM
    Primary source
    ECOCYC:G6560
    Locus tag
    b1068
    See related
    ASAP:ABE-0003627
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1053; mviM
    Summary
    yceM was identified as one of two ORFs adjacent to the flg locus in a region originally named mviS, then renamed mviN and mviM when sequenced; mviMN was thought to be required for mouse virulence in Salmonella, but the mviMN deletion in ST39 also removed flgM (Carsiotis, 1989). flgM was later shown to be able to complement the mviS phenotype, and thus flgM is the real mouse virulence gene mviS in this region of the Salmonella chromosome (Schmitt, 1994). [More information is available at EcoGene: EG13879].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (1126806..1127729)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribosomal-protein-S5-alanine N-acetyltransferase Neighboring gene DUF480 domain-containing protein YceH Neighboring gene lipid II flippase MurJ Neighboring gene flagellar biosynthesis protein FlgN

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Mutation of flgM attenuates virulence of Salmonella typhimurium, and mutation of fliA represses the attenuated phenotype. Schmitt CK, et al. J Bacteriol, 1994 Jan. PMID 8288531, Free PMC Article
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative oxidoreductase YceM

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1126806..1127729
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415586.1 putative oxidoreductase YceM [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415586.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2H4TMV8
      Conserved Domains (1) summary
      COG0673
      Location:1 → 306
      MviM; Predicted dehydrogenase [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.