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    ycgM putative isomerase/hydrolase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946115, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ycgM
    Official Full Name
    putative isomerase/hydrolase
    Primary source
    ECOCYC:G6617
    Locus tag
    b1180
    See related
    ASAP:ABE-0003957
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1168
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    Genomic context

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    Sequence:
    NC_000913.3 (1228079..1228738)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene inhibitor of g-type lysozyme Neighboring gene protein YmgN Neighboring gene PF05166 family protein YcgL Neighboring gene putative metal-chelating domain-containing protein YcgN Neighboring gene hemolysin E

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A universal metabolite repair enzyme removes a strong inhibitor of the TCA cycle. Zmuda AJ, et al. Nat Commun, 2024 Jan 29. PMID 38287013, Free PMC Article
    2. Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography. Fountoulakis M, et al. Electrophoresis, 1999 Aug. PMID 10493123
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables acetylpyruvate hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxaloacetate tautomerase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in oxaloacetate metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative isomerase/hydrolase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1228079..1228738
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415698.1 putative isomerase/hydrolase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415698.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6M9WRE7
      Conserved Domains (1) summary
      PRK10691
      Location:1 → 219
      PRK10691; fumarylacetoacetate hydrolase family protein
    Nucleotide Protein
    Heading Accession and Version

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