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    ynjH DUF1496 domain-containing protein YnjH [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946279, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ynjH
    Official Full Name
    DUF1496 domain-containing protein YnjH
    Primary source
    ECOCYC:G6955
    Locus tag
    b1760
    See related
    ASAP:ABE-0005858
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1758
    Summary
    First 18 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG14010]. The promoter of ynjH is predicted to be 28-dependent and can be transcribed by |FRAME: [More information is available at EcoCyc: G6955].
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    Genomic context

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    Sequence:
    NC_000913.3 (1841863..1842135, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene molybdopterin synthase sulfurtransferase Neighboring gene CDP-alcohol phosphatidyltransferase domain-containing protein YnjF Neighboring gene 5-hydroxy-CTP diphosphatase Neighboring gene glutamate dehydrogenase Neighboring gene DUF1266 domain-containing protein YnjI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In silico prediction and functional validation of sigma28-regulated genes in Chlamydia and Escherichia coli. Yu HH, et al. J Bacteriol, 2006 Dec. PMID 16997971, Free PMC Article
    2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF1496 domain-containing protein YnjH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1841863..1842135 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416274.1 DUF1496 domain-containing protein YnjH [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416274.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377A3A7
      Conserved Domains (1) summary
      pfam07383
      Location:47 → 89
      DUF1496; Protein of unknown function (DUF1496)
    Nucleotide Protein
    Heading Accession and Version

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