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    alx putative membrane-bound redox modulator Alx [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947607, updated on 17-Dec-2024

    Summary

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    Official Symbol
    alx
    Official Full Name
    putative membrane-bound redox modulator Alx
    Primary source
    ECOCYC:G7607
    Locus tag
    b3088
    See related
    ASAP:ABE-0010151
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3079; ygjT
    Summary
    Alx is a predicted to be a membrane-bound redox modulator . [More information is available at EcoCyc: G7607].
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    Genomic context

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    Sequence:
    NC_000913.3 (3238580..3239545)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF218 domain-containing protein YgjQ Neighboring gene putative oxidoreductase YgjR Neighboring gene serine/threonine:Na(+) symporter Neighboring gene inner membrane protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A pH-responsive riboregulator. Nechooshtan G, et al. Genes Dev, 2009 Nov 15. PMID 19933154, Free PMC Article
    2. Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate. Pomposiello PJ, et al. J Bacteriol, 2001 Jul. PMID 11395452, Free PMC Article
    3. Alkaline induction of a novel gene locus, alx, in Escherichia coli. Bingham RJ, et al. J Bacteriol, 1990 Apr. PMID 2108134, Free PMC Article
    4. Computational identification of noncoding RNAs in E. coli by comparative genomics. Rivas E, et al. Curr Biol, 2001 Sep 4. PMID 11553332
    5. Oxygen limitation modulates pH regulation of catabolism and hydrogenases, multidrug transporters, and envelope composition in Escherichia coli K-12. Hayes ET, et al. BMC Microbiol, 2006 Oct 6. PMID 17026754, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to pH IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within cellular response to pH IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative membrane-bound redox modulator Alx

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3238580..3239545
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_026201.1 putative membrane-bound redox modulator Alx [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for YP_026201.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X3J9V3
      Conserved Domains (1) summary
      TIGR03718
      Location:6 → 312
      R_switched_Alx; integral membrane protein, TerC family
    Nucleotide Protein
    Heading Accession and Version

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