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    yiaA PF05360 family inner membrane protein YiaA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948078, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yiaA
    Official Full Name
    PF05360 family inner membrane protein YiaA
    Primary source
    ECOCYC:EG11186
    Locus tag
    b3562
    See related
    ASAP:ABE-0011632
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3551
    Summary
    yiaB and yiaA are paralogs. [More information is available at EcoGene: EG11186].
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    Genomic context

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    Sequence:
    NC_000913.3 (3726924..3727361, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative lipoprotein YsaB Neighboring gene O-acetyltransferase WecH Neighboring gene PF05360 family inner membrane protein YiaB Neighboring gene xylulokinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and sequencing of the xylose isomerase and xylulose kinase genes of Escherichia coli. Lawlis VB, et al. Appl Environ Microbiol, 1984 Jan. PMID 6320721, Free PMC Article
    2. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    3. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
    4. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
    5. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in DNA damage response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PF05360 family inner membrane protein YiaA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3726924..3727361 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418019.4 PF05360 family inner membrane protein YiaA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418019.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0H3JJ44, A0A1X3IV13, A0A1X3JBN6, A0A8E0FJG6, A0A979GIM6, C3SN52
      Conserved Domains (1) summary
      PRK11383
      Location:1 → 145
      PRK11383; YiaB family inner membrane protein
    Nucleotide Protein
    Heading Accession and Version

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