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    yibA putative lyase containing HEAT-repeat [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948108, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yibA
    Official Full Name
    putative lyase containing HEAT-repeat
    Primary source
    ECOCYC:EG11187
    Locus tag
    b3594
    See related
    ASAP:ABE-0011744
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3583
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    Genomic context

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    Sequence:
    NC_000913.3 (3766337..3767179)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene glutathione transferase-like protein YibF Neighboring gene rhs element protein RhsA Neighboring gene pseudo Neighboring gene tetratricopeptide-like domain-containing protein YibG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of the rhsA locus from Escherichia coli K-12 and comparison of rhsA with other members of the rhs multigene family. Feulner G, et al. J Bacteriol, 1990 Jan. PMID 2403547, Free PMC Article
    2. Escherichia coli genes that reduce the lethal effects of stress. Han X, et al. BMC Microbiol, 2010 Feb 4. PMID 20128927, Free PMC Article
    3. The global transcriptional response of Escherichia coli to induced sigma 32 protein involves sigma 32 regulon activation followed by inactivation and degradation of sigma 32 in vivo. Zhao K, et al. J Biol Chem, 2005 May 6. PMID 15757896
    4. Screen for genes involved in radiation survival of Escherichia coli and construction of a reference database. Sargentini NJ, et al. Mutat Res, 2016 Nov-Dec. PMID 27718375
    5. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables oxidoreductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to antibiotic IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to radiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative lyase containing HEAT-repeat

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3766337..3767179
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418051.1 putative lyase containing HEAT-repeat [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418051.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1C9CJB4, A0A775TGP1
      Conserved Domains (2) summary
      PRK09687
      Location:1 → 280
      PRK09687; putative lyase; Provisional
      sd00044
      Location:92 → 117
      HEAT; HEAT repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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