U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    nlpA lipoprotein-28 [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948175, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    nlpA
    Official Full Name
    lipoprotein-28
    Primary source
    ECOCYC:EG10657
    Locus tag
    b3661
    See related
    ASAP:ABE-0011964
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3651
    Summary
    Pathogenicity island eip (EAEC strain 042) has inserted in the adjacent yicS-nepI intergenic region. [More information is available at EcoGene: EG10657]. NlpA is an inner membrane lipoprotein in Escherichia coli that has been shown to be non-essential for growth in Escherichia coli . [More information is available at EcoCyc: EG10657].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (3839175..3839993, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative arabinose exporter Neighboring gene putative transporter YicL Neighboring gene protein YicU Neighboring gene uncharacterized protein YicS Neighboring gene purine ribonucleoside exporter

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Repression of the inner membrane lipoprotein NlpA by Rns in enterotoxigenic Escherichia coli. Bodero MD, et al. J Bacteriol, 2007 Mar. PMID 17189357, Free PMC Article
    2. Lipoprotein 28, an inner membrane protein of Escherichia coli encoded by nlpA, is not essential for growth. Yamaguchi K, et al. J Bacteriol, 1988 Aug. PMID 2841301, Free PMC Article
    3. The nlpA lipoprotein gene is located near the selC tRNA gene on the Escherichia coli chromosome. Jin T, et al. J Bacteriol, 1992 Jun. PMID 1317383, Free PMC Article
    4. Outer membrane permeability of Escherichia coli K12: isolation, cloning and mapping of suppressors of a defined antibiotic-hypersensitive mutant. Qi SY, et al. Mol Gen Genet, 1991 Oct. PMID 1944231
    5. The ETT2 gene cluster, encoding a second type III secretion system from Escherichia coli, is present in the majority of strains but has undergone widespread mutational attrition. Ren CP, et al. J Bacteriol, 2004 Jun. PMID 15150243, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in D-methionine transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in methionine import across plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within methionine transport EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    lipoprotein-28

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3839175..3839993 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418117.1 lipoprotein-28 [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418117.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A779UF32, A0A8S7RK53
      Conserved Domains (1) summary
      PRK09861
      Location:1 → 272
      PRK09861; lipoprotein NlpA
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.