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    ytfB cell division protein YtfB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948727, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ytfB
    Official Full Name
    cell division protein YtfB
    Primary source
    ECOCYC:G7864
    Locus tag
    b4206
    See related
    ASAP:ABE-0013756
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4202
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    Genomic context

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    Sequence:
    NC_000913.3 (4428079..4428717, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 50S ribosomal subunit protein L9 Neighboring gene DUF2686 domain-containing protein YjfZ Neighboring gene pseudo Neighboring gene peptidyl-prolyl cis-trans isomerase FklB Neighboring gene D-serine/alanine/glycine/:H(+)symporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The novel E. coli cell division protein, YtfB, plays a role in eukaryotic cell adhesion. Bottomley AL, et al. Sci Rep, 2020 Apr 21. PMID 32317661, Free PMC Article
    2. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    3. YtfB, an OapA Domain-Containing Protein, Is a New Cell Division Protein in Escherichia coli. Jorgenson MA, et al. J Bacteriol, 2018 Jul 1. PMID 29686141, Free PMC Article
    4. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The novel E. coli cell division protein, YtfB, plays a role in eukaryotic cell adhesion.
      Title: The novel E. coli cell division protein, YtfB, plays a role in eukaryotic cell adhesion.
    2. YtfB directly affects cell division, most likely through its OapA domain.
      Title: YtfB, an OapA Domain-Containing Protein, Is a New Cell Division Protein in Escherichia coli.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables peptidoglycan binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within FtsZ-dependent cytokinesis IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell division protein YtfB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4428079..4428717 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418627.4 cell division protein YtfB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418627.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AMN1, A0A8S7CN62
      Conserved Domains (1) summary
      COG3061
      Location:1 → 212
      OapA; Cell envelope opacity-associated protein A (function unknown) [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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