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    rihC ribonucleoside hydrolase RihC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944796, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rihC
    Official Full Name
    ribonucleoside hydrolase RihC
    Primary source
    ECOCYC:EG11082
    Locus tag
    b0030
    See related
    ASAP:ABE-0000109
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0031; yaaF
    Summary
    The rihC gene encodes a ribonucleoside hydrolase with a broad substrate specificity . [More information is available at EcoCyc: EG11082].
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    Genomic context

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    Sequence:
    NC_000913.3 (27293..28207)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase FkpB Neighboring gene 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Neighboring gene 4-hydroxy-tetrahydrodipicolinate reductase Neighboring gene carbamoyl-phosphate synthetase small subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Kinetic isotope effects of nucleoside hydrolase from Escherichia coli. Hunt C, et al. Biochim Biophys Acta, 2005 Aug 10. PMID 16027052
    2. The RihA, RihB, and RihC ribonucleoside hydrolases of Escherichia coli. Substrate specificity, gene expression, and regulation. Petersen C, et al. J Biol Chem, 2001 Jan 12. PMID 11027694
    3. Nucleotide sequence of the lsp-dapB interval in Escherichia coli. Bouvier J, et al. Nucleic Acids Res, 1991 Jan 11. PMID 2011499, Free PMC Article
    4. Comparison of the PhoPQ regulon in Escherichia coli and Salmonella typhimurium. Monsieurs P, et al. J Mol Evol, 2005 Apr. PMID 15883881
    5. LuxArray, a high-density, genomewide transcription analysis of Escherichia coli using bioluminescent reporter strains. Van Dyk TK, et al. J Bacteriol, 2001 Oct. PMID 11544210, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables adenosine nucleosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, hydrolyzing N-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables inosine nucleosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables purine nucleosidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ribosylpyrimidine nucleosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables uridine nucleosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables uridine nucleosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in nucleobase-containing compound metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in purine nucleobase metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in purine nucleoside catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in pyrimidine nucleobase metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within ribonucleoside catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    ribonucleoside hydrolase RihC
    NP_414571.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      27293..28207
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414571.1 ribonucleoside hydrolase RihC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414571.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3R0MSK0
      Conserved Domains (1) summary
      PRK10768
      Location:1 → 304
      PRK10768; ribonucleoside hydrolase RihC; Provisional
    Nucleotide Protein
    Heading Accession and Version

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