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    ybcH putative exopolysaccharide secretion system auxiliary component [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945186, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybcH
    Official Full Name
    putative exopolysaccharide secretion system auxiliary component
    Primary source
    ECOCYC:EG12448
    Locus tag
    b0567
    See related
    ASAP:ABE-0001937
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0559
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    Genomic context

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    Sequence:
    NC_000913.3 (587091..587981, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene omptin family outer membrane protease OmpT Neighboring gene DNA-binding transcriptional activator EnvY Neighboring gene exopolysaccharide secretion system outer membrane protein NfrA Neighboring gene cyclic di-3',5'-guanylate-activated glycosyltransferase Neighboring gene sensor histidine kinase CusS Neighboring gene DNA-binding transcriptional activator CusR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Systematic Localization of Escherichia coli Membrane Proteins. Sueki A, et al. mSystems, 2020 Mar 3. PMID 32127419, Free PMC Article
    2. Two overlapping genes encoding membrane proteins required for bacteriophage N4 adsorption. Kiino DR, et al. J Bacteriol, 1993 Nov. PMID 8226649, Free PMC Article
    3. A Novel Locally c-di-GMP-Controlled Exopolysaccharide Synthase Required for Bacteriophage N4 Infection of Escherichia coli. Junkermeier EH, et al. mBio, 2021 Dec 21. PMID 34903052, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in secretion by cell IGC
    Inferred from Genomic Context
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell outer membrane HDA PubMed 

    General protein information

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    Preferred Names
    putative exopolysaccharide secretion system auxiliary component

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      587091..587981 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415099.1 putative exopolysaccharide secretion system auxiliary component [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415099.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1V2GET9, A0A8S7EIM7
      Conserved Domains (1) summary
      PRK09936
      Location:1 → 296
      PRK09936; DUF4434 family protein
    Nucleotide Protein
    Heading Accession and Version

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