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    ydjM inner membrane protein YdjM [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945644, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydjM
    Official Full Name
    inner membrane protein YdjM
    Primary source
    ECOCYC:G6933
    Locus tag
    b1728
    See related
    ASAP:ABE-0005768
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1726
    Summary
    LexA regulon. [More information is available at EcoGene: EG13989]. YdjM is an inner membrane protein. [More information is available at EcoCyc: G6933].
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    Genomic context

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    Sequence:
    NC_000913.3 (1810211..1810801)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YniB Neighboring gene hexitol phosphatase B Neighboring gene cystine/sulfocysteine:cation symporter Neighboring gene protein YdjO

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of additional genes belonging to the LexA regulon in Escherichia coli. Fernández De Henestrosa AR, et al. Mol Microbiol, 2000 Mar. PMID 10760155
    2. LuxArray, a high-density, genomewide transcription analysis of Escherichia coli using bioluminescent reporter strains. Van Dyk TK, et al. J Bacteriol, 2001 Oct. PMID 11544210, Free PMC Article
    3. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    inner membrane protein YdjM

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1810211..1810801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416242.6 inner membrane protein YdjM [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416242.6

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAN3PUU4
      Conserved Domains (1) summary
      PRK11648
      Location:1 → 195
      PRK11648; metal-dependent hydrolase
    Nucleotide Protein
    Heading Accession and Version

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