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    psuT putative pseudouridine transporter [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946671, updated on 3-Dec-2024

    Summary

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    Official Symbol
    psuT
    Official Full Name
    putative pseudouridine transporter
    Primary source
    ECOCYC:EG12032
    Locus tag
    b2164
    See related
    ASAP:ABE-0007163
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2157; pscT; yeiM
    Summary
    psuT, nupC, nupX, and yegT are paralogs. [More information is available at EcoGene: EG12032]. The YeiM protein is an uncharacterised member of the NUP family of nucleoside transporters . [More information is available at EcoCyc: EG12032].
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    Genomic context

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    Sequence:
    NC_000913.3 (2256085..2257335, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pyrimidine-specific ribonucleoside hydrolase RihB Neighboring gene DNA-binding transcriptional activator YeiL Neighboring gene pseudouridine-5'-phosphate glycosidase Neighboring gene putative pseudouridine kinase Neighboring gene fructose-specific PTS multiphosphoryl transfer protein FruA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic characterization of novel transport protein families revealed by genome analyses. Saier MH Jr, et al. Biochim Biophys Acta, 1999 Feb 25. PMID 10082980
    2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables nucleoside transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables nucleoside transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in nucleoside transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in nucleoside transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative pseudouridine transporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2256085..2257335 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416669.1 putative pseudouridine transporter [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416669.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T6A4S5
      Conserved Domains (1) summary
      COG1972
      Location:1 → 414
      NupC; Nucleoside permease NupC [Nucleotide transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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