U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yejB putative oligopeptide ABC transporter membrane subunit YejB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946679, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yejB
    Official Full Name
    putative oligopeptide ABC transporter membrane subunit YejB
    Primary source
    ECOCYC:EG12038
    Locus tag
    b2178
    See related
    ASAP:ABE-0007208
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2172
    Summary
    YejABEF microcin C ABC transport system. [More information is available at EcoGene: EG12038]. YejB is an integral membrane component of the YejA/YejB/YejE/YejF ABC transporter. [More information is available at EcoCyc: EG12038].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (2274179..2275273)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative c-di-GMP phosphodiesterase PdeN Neighboring gene putative oligopeptide ABC transporter periplasmic binding protein YejA Neighboring gene putative oligopeptide ABC transporter membrane subunit YejE Neighboring gene putative oligopeptide ABC transporter ATP binding subunit YejF

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Characterization of peptide chain length and constituency requirements for YejABEF-mediated uptake of microcin C analogues. Vondenhoff GH, et al. J Bacteriol, 2011 Jul. PMID 21602342, Free PMC Article
    2. The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C. Novikova M, et al. J Bacteriol, 2007 Nov. PMID 17873039, Free PMC Article
    3. Gene fusions and gene duplications: relevance to genomic annotation and functional analysis. Serres MH, et al. BMC Genomics, 2005 Mar 9. PMID 15757509, Free PMC Article
    4. Identification of Escherichia coli genes that are specifically expressed in a murine model of septicemic infection. Khan MA, et al. Infect Immun, 2002 Jul. PMID 12065479, Free PMC Article
    5. A small bacterial RNA regulates a putative ABC transporter. Antal M, et al. J Biol Chem, 2005 Mar 4. PMID 15618228

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. An minimal peptide chain length of 6 amino acids and an N-terminal formyl-methionyl-arginyl sequence of microcin C are required for YejABEF-mediated uptake.
      Title: Characterization of peptide chain length and constituency requirements for YejABEF-mediated uptake of microcin C analogues.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in microcin transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in microcin transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within microcin transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within oligopeptide transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in peptide transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative oligopeptide ABC transporter membrane subunit YejB
    NP_416683.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2274179..2275273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416683.1 putative oligopeptide ABC transporter membrane subunit YejB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416683.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A826IX71
      Conserved Domains (1) summary
      PRK15133
      Location:1 → 364
      PRK15133; microcin C ABC transporter permease YejB; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.