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    yfaP DUF2135 domain-containing protein YfaP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946728, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfaP
    Official Full Name
    DUF2135 domain-containing protein YfaP
    Primary source
    ECOCYC:G7152
    Locus tag
    b2225
    See related
    ASAP:ABE-0007357
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2218
    Summary
    YfaP is a hypothetical protein. [More information is available at EcoCyc: G7152].
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    Genomic context

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    Sequence:
    NC_000913.3 (2327367..2328143, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene acetyl-CoA:acetoacetyl-CoA transferase subunit beta Neighboring gene short chain fatty acid transporter Neighboring gene acetyl-CoA acetyltransferase Neighboring gene tandem DUF2300 domain-containing protein YfaQ Neighboring gene pseudo Neighboring gene DUF1175 domain-containing protein YfaT

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacterial alpha2-macroglobulins: colonization factors acquired by horizontal gene transfer from the metazoan genome? Budd A, et al. Genome Biol, 2004. PMID 15186489, Free PMC Article
    2. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    3. BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria. Berven FS, et al. Nucleic Acids Res, 2004 Jul 1. PMID 15215418, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF2135 domain-containing protein YfaP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2327367..2328143 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416729.1 DUF2135 domain-containing protein YfaP [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416729.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377BTK8
      Conserved Domains (1) summary
      COG4676
      Location:1 → 258
      YfaP; Uncharacterized conserved protein YfaP, DUF2135 family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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