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    yfcO DUF2544 domain-containing protein YfcO [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946620, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfcO
    Official Full Name
    DUF2544 domain-containing protein YfcO
    Primary source
    ECOCYC:G7203
    Locus tag
    b2332
    See related
    ASAP:ABE-0007700
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2326
    Summary
    Overexpression causes abnormal biofilm architecture. [More information is available at EcoGene: EG14118]. YfcO is a hypothetical protein. [More information is available at EcoCyc: G7203].
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    Genomic context

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    Sequence:
    NC_000913.3 (2449228..2450049, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribosomal protein L3 N(5)-glutamine methyltransferase Neighboring gene putative endonuclease SmrB Neighboring gene putative fimbrial protein YfcP Neighboring gene putative fimbrial protein YfcQ Neighboring gene putative fimbrial protein YfcR Neighboring gene putative fimbrial chaperone YfcS

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The YfcO fimbriae gene enhances adherence and colonization abilities of avian pathogenic Escherichia coli in vivo and in vitro. Li Y, et al. Microb Pathog, 2016 Nov. PMID 27616446
    2. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    3. Systematic characterization of Escherichia coli genes/ORFs affecting biofilm formation. Tenorio E, et al. FEMS Microbiol Lett, 2003 Aug 8. PMID 12900028
    4. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results suggest that yfcO contributes to avian pathogenic Escherichia coli virulence through bacterial adherence to host tissues.
      Title: The YfcO fimbriae gene enhances adherence and colonization abilities of avian pathogenic Escherichia coli in vivo and in vitro.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF2544 domain-containing protein YfcO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2449228..2450049 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416835.2 DUF2544 domain-containing protein YfcO [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416835.2

      Status: PROVISIONAL

      Conserved Domains (1) summary
      pfam11245
      Location:44 → 273
      DUF2544; Protein of unknown function (DUF2544)
    Nucleotide Protein
    Heading Accession and Version

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