U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    rbsK ribokinase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948260, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    rbsK
    Official Full Name
    ribokinase
    Primary source
    ECOCYC:EG10818
    Locus tag
    b3752
    See related
    ASAP:ABE-0012266
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3746
    Summary
    HT_Cmplx20_Cyt: [More information is available at EcoGene: EG10818]. RbsK is a ribokinase that belongs to the ribokinase subfamily of sugar kinases . [More information is available at EcoCyc: EG10818].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (3937294..3938223)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribose ABC transporter membrane subunit Neighboring gene ribose ABC transporter periplasmic binding protein Neighboring gene ncRNA Neighboring gene DNA-binding transcriptional dual regulator RbsR Neighboring gene putative transporter HsrA Neighboring gene DNA-binding transcriptional regulator YieP

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The significance of ribokinase for ribose utilization by Escherichia coli. Anderson A, et al. Biochim Biophys Acta, 1969 Feb 18. PMID 4889152
    2. Ribokinase from E. coli: expression, purification, and substrate specificity. Chuvikovsky DV, et al. Bioorg Med Chem, 2006 Sep 15. PMID 16784868
    3. Purification, characterization, and crystallization of Escherichia coli ribokinase. Sigrell JA, et al. Protein Sci, 1997 Nov. PMID 9385653, Free PMC Article
    4. Induced fit on sugar binding activates ribokinase. Sigrell JA, et al. J Mol Biol, 1999 Jul 30. PMID 10438599
    5. The effect of inorganic phosphate on the activity of bacterial ribokinase. Maj MC, et al. J Protein Chem, 2001 Feb. PMID 11563694

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: Ribokinase from Escherichia coli K12. Nucleotide sequence and overexpression of the rbsK gene and purification of ribokinase.
    2. Homologies between E. coli and human ribokinase.
      Title: Identification and characterization of human ribokinase and comparison of its properties with E. coli ribokinase and human adenosine kinase.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ribokinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ribokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in D-ribose catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in D-ribose catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in D-ribose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in carbohydrate phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in small molecule metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ribokinase
    NP_418208.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3937294..3938223
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418208.1 ribokinase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418208.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7I527
      Conserved Domains (1) summary
      PRK11142
      Location:4 → 308
      PRK11142; ribokinase; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.