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    TRK-TTT3-4 tRNA-Lys (anticodon TTT) 3-4 [ Homo sapiens (human) ]

    Gene ID: 100049613, updated on 10-Dec-2024

    Summary

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    Official Symbol
    TRK-TTT3-4provided by HGNC
    Official Full Name
    tRNA-Lys (anticodon TTT) 3-4provided by HGNC
    Primary source
    HGNC:HGNC:33256
    See related
    AllianceGenome:HGNC:33256
    Gene type
    tRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TRNAK3; TRK-TTT3-3
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    Genomic context

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    See TRK-TTT3-4 in Genome Data Viewer
    Location:
    11q12.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (59560335..59560407, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (59511258..59511330, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (59327808..59327880, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102723575 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3365 Neighboring gene tRNA-Phe (anticodon GAA) 1-3 Neighboring gene RNA, U7 small nuclear 58 pseudogene Neighboring gene long intergenic non-protein coding RNA 2739 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:59332897-59333398 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:59333399-59333898 Neighboring gene tRNA-Phe (anticodon GAA) 2-1 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:59343523-59344722 Neighboring gene oxysterol binding protein Neighboring gene microRNA 3162

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular dynamics simulations of human tRNA Lys,3 UUU: the role of modified bases in mRNA recognition. McCrate NE, et al. Nucleic Acids Res, 2006. PMID 17012271, Free PMC Article
    2. Analysis of a human gene cluster coding for tRNA(GAAPhe) and tRNA(UUULys). Doran JL, et al. Gene, 1987. PMID 3678837
    3. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The role of modified bases in preserving canonical tRNA anticodon structure was examined.
      Title: Molecular dynamics simulations of human tRNA Lys,3 UUU: the role of modified bases in mRNA recognition.
    Submit: New GeneRIF Correction

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • tRNA-Lys (TTT) 3-4
    • tRNA-Lys-TTT-3-3
    • transfer RNA lysine 3 (anticodon UUU)
    • transfer RNA-Lys (TTT) 3-3
    • transfer RNA-Lys (TTT) 3-4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      59560335..59560407 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      59511258..59511330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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