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    citE citrate lyase beta subunit [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945406, updated on 3-Dec-2024

    Summary

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    Official Symbol
    citE
    Official Full Name
    citrate lyase beta subunit
    Primary source
    ECOCYC:G6342
    Locus tag
    b0616
    See related
    ASAP:ABE-0002122
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0609; ybdW
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    Genomic context

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    Sequence:
    NC_000913.3 (649582..650490, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene triphosphoribosyl-dephospho-CoA synthase Neighboring gene apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Neighboring gene citrate lyase alpha subunit Neighboring gene citrate lyase acyl carrier protein Neighboring gene citrate lyase synthetase Neighboring gene sensor histidine kinase DpiB Neighboring gene DNA-binding transcriptional dual regulator DpiA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reevaluation of citrate lyase from Escherichia coli. Quentmeier A, et al. Biochim Biophys Acta, 1987 May 27. PMID 3555623
    2. CORRELATION OF CITRATE UTILIZATION BY MEMBERS OF THE COLON-AEROGENES GROUP WITH OTHER DIFFERENTIAL CHARACTERISTICS AND WITH HABITAT. Koser SA. J Bacteriol, 1924 Jan. PMID 16559027, Free PMC Article
    3. Why a co-substrate is required for anaerobic growth of Escherichia coli on citrate. Lütgens M, et al. J Gen Microbiol, 1980 Jul. PMID 6997437
    4. SOS response induction by beta-lactams and bacterial defense against antibiotic lethality. Miller C, et al. Science, 2004 Sep 10. PMID 15308764
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables citrate (pro-3S)-lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables citryl-CoA lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables magnesium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in acetyl-CoA metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in acetyl-CoA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in citrate metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in oxaloacetate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of ATP-independent citrate lyase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of ATP-independent citrate lyase complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    citrate lyase beta subunit
    NP_415149.4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      649582..650490 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415149.4 citrate lyase beta subunit [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415149.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FR69, A0A403D0H5, A0A8S7EHV3
      Conserved Domains (1) summary
      cl21481
      Location:12 → 299
      malate_synt; Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA. This reaction is part of the glyoxylate cycle, which allows certain organisms, like plants and fungi, to derive their ...
    Nucleotide Protein
    Heading Accession and Version

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